Ji Hyun Bak, Seogjoo J. Jang, and Changbong Hyeon "Implications for human odor sensing revealed from the statistics of the odorant-receptor interactions," PLOS Computational Biology 14, e1006175 (2018) (Manuscript)
Daniel Montemayor, Eva Rivera, and Seogjoo J. Jang, "Computational modeling of exciton-bath Hamiltonians for light harvesting 2 and light harvesting 3 complexes of purple photosynthetic bacteria at room temperature," Journal of Physical Chemistry B 122, 3815-3825 (2018)
2017
Seogjoo Jang and Gregory A. Voth, "Non-uniqueness of quantum transition state
theory and general dividing surfaces in the path integral space," Journal of
Chemical Physics 146, 174106 (2017)
Seogjoo Jang and Changbong Hyeon, "Kinetic model for the activation of mammalian
olfactory receptor," Journal of Physical Chemistry B, 121 1304 (2017)
2016
Seogjoo Jang, "Generalized quantum Fokker-Planck equation for photo induced nonequilibrium
processes with positive definiteness condition," Journal of Chemical Physics 144, 214102 (2016)
Seogjoo Jang and Gregory A. Voth, "Can quantum transition state theory be defined as an
exact t=0+limit?," Journal of Chemical Physics 144, 084110 (2016)
2015
Eric Block, Seogjoo Jang, Victor Batista, and Hanyi Zhuang, "Reply to Turin et al.: Vibrational
theory of olfaction is implausible," Proceedings of the National Academy of Sciences, USA 112,
E3155 (2015)
Eric Block, Seogjoo Jang, Hiroaki Matsunami, Sivakumar Sekharan, Berenice Dethier, Mehmed
Z. Ertem, Sivaji Gundala, Yi Pan, Shengju Li, Zhen Li, Stephene N. Lodge, Mehmet Ozbil, Huihong
Jiang, Sonia F. Penalba, Victor Batista, and Hanyi Zhuang, "Implausibility of the vibrational theory
of olfaction," Proceedings of the National Academy of Sciences, USA 112, E2766 (2015)
Seogjoo Jang and Andrés Montoya-Castillo, "Charge hopping dynamics along a disordered
chain in quantum environments: Comparative study of different rate kernels," Journal of Physical
Chemistry B 119, 7659 (2015)
Seogjoo Jang, Eva Rivera, and Daniel Montemayor, "Molecular level design principle behind
optimal sizes of photosynthetic LH2 complex: Taming disorder through cooperation of hydrogen
bonding and quantum delocalization," Journal of Physical Chemistry Letters 6, 928 (2015)
2014
Seogjoo Jang, Stephan Hoyer, Birgitta Whaley, and Graham R. Fleming, "Generalized master
equation with non-Markovian multichromophoric Förster resonance energy transfer for modular exciton
densities," Physical Review Letters 113, 188102 (2014)
Seogjoo Jang, Hoda Hossein-Nejad, and Gregory D. Scholes, "Generalized Förster resonance
energy transfer," in Quantum Eects in Biology (Edited by Masoud Mohseni, Yasser Omar, Gregory
Engel and Martin Plenio, Cambridge University Press, Cambridge, UK) (2014)
Alireza Shabani, Masoud Mohseni, Seogjoo Jang, Akihito Ishizaki, Martin Plenio, Patrick
Rebentrost, Alan Aspuru-Guzik, Jianshu Cao, Seth Lloyd, and Robert Silbey, "Open quantum system
approaches to biological systems`," in Quantum Effects in Biology (Edited by Masoud Mohseni,
Yasser Omar, Gregory Engel, and Martin Plenio, Cambridge University Press, Cambridge, UK) (2014)
Seogjoo Jang, Anton Sinitskiy, and Gregory A. Voth, "Can the ring polymer molecular dynamics
method be interpreted as real time quantum dynamics?," Journal of Chemical Physics 140,
154103 (2014)
2013
Seogjoo Jang, "Real time quantum dynamics pre-averaged over imaginary time path integral:
A formal basis for both Centroid Molecular Dynamics and Ring Polymer Molecular Dynamics," arXiv:
1308.3805 (2013)
Seogjoo Jang, "Bridging the gap between coherent and incoherent resonance energy transfer
dynamics by quantum master equations in polaron picture" in Ultrafast Molecular Dynamics at the
Nanoscale (Edited by Stefan Haacke and Irene Burghardt, Pan Stanford Publishing, Singapore), submitted
(2013)
Seogjoo Jang, Timothy Berkelbach, and David R. Reichman, "Coherent quantum dynamics
in donor-bridge-acceptor nonadiabatic processes: Beyond the hopping and super-exchange mechanisms,"
New Journal of Physics 15, 105020 (2013)
Praveen Kumar and Seogjoo Jang, "Emission lineshapes of the B850 band of light-harvesting
2 (LH2) complex in purple bacteria: A second order time-nonlocal quantum master equation approach,"
Journal of Chemical Physics 138, 135101 (2013)
Seogjoo Jang and Yuan-Chung Cheng, "Resonance energy flow dynamics of coherently delocalized
excitons in biological and macromolecular systems: Recent theoretical advances and open
issues," Wiley Interdisciplinary Reviews (WIREs) on Computational Molecular Science (Invitational
expert review article) 3, 84-104 (2013)
2012
Seogjoo Jang, "Nonadiabatic quantum Liouville and master equations in the adiabatic basis,"
Journal of Chemical Physics (Special Issue on Nonadiabatic Dynamics) 137, 22A536 (2012)
Lei Yang, Murali Devi, and Seogjoo Jang, "Polaronic quantum master equation theory of inelastic
and coherent resonance energy transfer for soft systems" Journal of Chemical Physics 137,
024101 (2012)
Seogjoo Jang, "Multistep quantum master equation theory for response functions in four wave
mixing electronic spectroscopy of multichromophoric macromolecules," Bulletin of the Korean Chem-
ical Society (Invitational contribution for a special edition) 33, 997 (2012)
2011
Seogjoo Jang, Robert J. Silbey, Ralf Kunz, Clemens Hofmann, and Jöurgen Köhler, "Is there
elliptic distortion in the light harvesting complex 2 of purple bacteria?" Journal of Physical Chemistry
B 115, 12947 (2011)
Paiboon Sreearunothai, Alexis Estrada, Sadayuki Asaoka, Marta Kowalczyk, Seogjoo Jang,
Andrew Cook, Jack Preses, and John Miller, "Triplet transport to and trapping by acceptor end
groups on conjugated polyfluorene chains," Journal of Physical Chemistry C 115, 19569 (2011)
Seogjoo Jang, "Theory of multichromophoric coherent resonance energy transfer: A polaronic
quantum master equation approach," Journal of Chemical Physics, 135, 034105 (2011)
2010
Lei Yang, Stefano Caprasecca, Benedetta Mennucci, and Seogjoo Jang, "Theoretical investigation
of the mechanism and dynamics of intramolecular coherent resonance energy transfer in soft
molecules: A case study of dithia-anthracenophane," Journal of the American Chemical Society 132,
16911 (2010)
2009
Seogjoo Jang, "Theory of coherent resonance energy transfer for coherent initial condition,"
Journal of Chemical Physics 131, 164101 (2009)
2008
Seogjoo Jang, Yuan-Chung Cheng, David R. Reichman, and Joel D. Eaves, "Theory of coherent
resonance energy transfer," Journal of Chemical Physics 129, 101104 (2008)
Vijayakumar Ramalingam, Maciej E. Domaradzki, Seogjoo Jang, and Rajeev S. Muthyala,
"Carbonyl groups as molecular valves to regulate chloride binding to squaramides," Organic Letters
10, 3315 (2008)
2007
Seogjoo Jang, "Generalization of the Förster resonance energy transfer theory for quantum
mechanical modulation of the donor-acceptor coupling," Journal of Chemical Physics 127, 174710
(2007)
Seogjoo Jang, Marshall D. Newton, and Robert J. Silbey, "Multichromophoric Förster resonance
energy transfer from B800 to B850 in the light harvesting complex 2: Evidence for subtle
energetic optimization by purple bacteria," Journal of Physical Chemistry B 111, 6807 (2007)
2006
Seogjoo Jang and Marshall D. Newton;"Closed form expressions of quantum electron transfer
rate based on the stationary phase approximation," Journal of Physical Chemistry B 110, 18996
(2006)
Seogjoo Jang; "Path-integral centroid dynamics for general initial conditions: A nonequilibrium
projection operator formulation," Journal of Chemical Physics 124, 064107 (2006)
2005
Seogjoo Jang and Marshall D. Newton; "Theory of torsional non-Condon electron transfer: A
generalized spin-boson Hamiltonian and its nonadiabatic limit solution," Journal of Chemical Physics
122, 024501 (2005)
Eitan Geva, Seogjoo Jang, and Gregory A. Voth; "Quantum Rate Theory: A Path Integral Centroid
Perspective," in Encyclopedia of Materials Modeling: Vol. I, Fundamental Models and Methods,
S. Yip, Editor (Springer-Verlag, 2005)
2004
Seogjoo Jang, Marshall D. Newton, and Robert J. Silbey; "Multichromophoric Förster resonance
energy transfer," Physical Review Letters 92, 218301 (2004)
2003
Seogjoo Jang and Robert J. Silbey; "Single complex line shapes of the B850 band of LH2,"
Journal of Chemical Physics 118, 9324 (2003)
Seogjoo Jang and Robert J. Silbey; "Theory of single molecule line shapes of multichromophoric
macromolecules," Journal of Chemical Physics 118, 9312 (2003)
2002
Seogjoo Jang and Jianshu Cao ; "Optimal quantum control in dissipative environments :
General formalism and perturbative limits," in Laser Control and Manipulation of Molecules (ACS
Symposium Series) 821, 132 (2002)
Seogjoo Jang, Jianshu Cao, and Robert J. Silbey ; "On the temperature dependence of molecular
line shapes due to linearly coupled phonon bands," Journal of Physical Chemistry B 106, 8313
(2002)
Seogjoo Jang, Jianshu Cao, and Robert J. Silbey ; "Fourth order quantum master equation
and its Markovian bath limit," Journal of Chemical Physics 116, 2705 (2002); 117, 10428 (2002)
Seogjoo Jang, Younjoon Jung, and Robert J. Silbey ; "Nonequilibrium generalization of Förster-
Dexter theory for excitation energy transfer," Chemical Physics 275, 319 (2002)
2001
Seogjoo Jang, Soonmin Jang, and Gregory A. Voth ; "Applications of higher order composite
factorization schemes in imaginary time path integral simulations," Journal of Chemical Physics 115,
7832 (2001)
Seogjoo Jang, Sara E. Dempster, and Robert J. Silbey ; "Characterization of the static disorder
in the B850 band of LH2," Journal of Physical Chemistry B 105, 6655 (2001)
Sara E. Dempster, Seogjoo Jang, and Robert J. Silbey ; "Single molecule spectroscopy of disordered
circular aggregates: A perturbation analysis," Journal of Chemical Physics 114, 10015 (2001)
Seogjoo Jang and Jianshu Cao ; "Nonadiabatic instanton calculation of multistate electron
transfer reaction rate: Interference effects in three and four states systems," Journal of Chemical
Physics 114, 9959 (2001)
2000
David R. Reichman, Pierre-Nicholas Roy, Seogjoo Jang, and Gregory A. Voth ; "A Feynman
path centroid dynamics approach for the computation of time correlation functions involving nonlinear
operators," Journal of Chemical Physics 113, 919 (2000)
Seogjoo Jang and Gregory A. Voth ; "A relationship between centroid dynamics and path
integral quantum transition state theory," Journal of Chemical Physics 112, 8747 (2000)
1999
Seogjoo Jang, Charles D. Schwieters, and Gregory A. Voth ; "A modication of path integral
quantum transition state theory for asymmetric and metastable potentials," Journal of Physical
Chemistry A 103, 9527 (1999)
Soonmin Jang, Seogjoo Jang, and Gregory A. Voth ; "Quantum molecular dynamics simulations
of low-temperature high energy density matter : Solid p .. H2=Li and p .. H2=B," Journal of Physical
Chemistry A 103, 9512 (1999)
Pierre-Nicholas Roy, Seogjoo Jang, and Gregory A. Voth ; "Feynman path centroid dynamics
for Fermi-Dirac statistics," Journal of Chemical Physics 111, 5303 (1999)
Seogjoo Jang and Gregory A. Voth ; "A derivation of centroid molecular dynamics and other approximate
time evolution methods for path integral centroid variables," Journal of Chemical Physics
111, 2371 (1999)
Seogjoo Jang and Gregory A. Voth ; "Path integral centroid variables and the formulation of
their exact real time dynamics," Journal of Chemical Physics 111, 2357 (1999)
Seogjoo Jang and Gregory A. Voth ; "Response to Comment on Simple reversible Molecular Dynamics
algorithms for Nos&eactue;-Hoover chain dynamics," Journal of Chemical Physics 110, 3626 (1999)
1998
Seogjoo Jang and Gregory A. Voth ; "Lithium impurity recombination in solid para-hydrogen: A
path integral quantum transition state theory study," Journal of Chemical Physics 108, 4098 (1998)
1997
Seogjoo Jang and Gregory A. Voth ; "Simple reversible Molecular Dynamics algorithms for
Nosé-Hoover chain dynamics," Journal of Chemical Physics 107, 9514 (1997)
1995
Seogjoo Jang, Kook Joe Shin, and Sangyoub Lee ; "Effects of excitation migration and translational
diffusion in the luminescence quenching dynamics," Journal of Chemical Physics 102, 815
(1995)